How does intermittent fasting affect the gut microbiome? (2024)

How does intermittent fasting affect the gut microbiome? (1)By Vijay Kumar MalesuFeb 14 2024Reviewed by Susha Cheriyedath, M.Sc.

In a recent study published in the journal Frontiers in Nutrition, a group of researchers evaluated how various intermittent fasting (IF) regimens impact the composition of the human gut microbiome.

How does intermittent fasting affect the gut microbiome? (2)Study: The impact of intermittent fasting on gut microbiota: a systematic review of human studies. Image Credit:Tatiana Shepeleva/ Shutterstock

Background

Fasting, the voluntary avoidance of food and drinks, varies from calorie restriction (CR), which reduces daily calorie intake without causing malnutrition. Fasting is categorized into IF and prolonged fasting (PF), with PF involving water-only consumption for two or more days. IF is popular in various lifestyles, religions, and cultures, encompassing methods like time-restricted eating (TRF), where food intake is limited to 12-18 hours daily, alternate day fasting (ADF), and the 5:2 diet, which alternates between fasting and unrestricted eating days. While TRF may not reduce overall calorie intake, ADF limits calories to about 25% of daily needs on fasting days. Research indicates IF benefits weight loss, blood pressure, anti-inflammatory responses, and metabolic health, partly through modifications in the gut microbiota, impacting glucose metabolism and inflammation. Further research is needed to clarify the specific effects of IF on the human gut microbiome and its implications for health due to the current heterogeneity and limited scope of existing studies.

About the study

The present review explored IF effects on gut microbiota, following Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA)2020 guidelines and registered with the International Prospective Register of Systematic Reviews (PROSPERO). Initial and follow-up searches across four databases targeted English studies up to 2021, including direct author contacts, to ensure comprehensive IF research coverage.

The review's inclusivity spanned various IF modalities, initially focusing on TRF before expanding to ADF and the 5:2 diet in response to the scarcity of TRF-specific research. Exclusions were made for non-human, observational, and non-experimental studies, among others, favoring randomized controlled trials, quasi-experimental studies, and pilot studies without restrictions on participant demographics.

The selection process involved a thorough screening of titles and abstracts by three independent reviewers, utilizing Rayyan Qatar Computing Research Institute (QCRI) for efficient collaboration and conflict resolution. This initial phase reduced the pool from 1,172 records to 22 potential studies, further narrowed down through consensus after full-text review. The expansion of inclusion criteria and a second search round eventually enriched the review with eight pertinent studies despite the initial limitation to TRF studies.

Data extraction was evenly distributed among reviewers, focusing on outcomes related to gut microbiota diversity and composition alongside study and participant characteristics without making assumptions about unclear data. The risk of bias was rigorously assessed using Cochrane's tools, facilitating an unbiased and thorough synthesis of the available evidence on the impact of IF on gut microbiota.

Study results

The present systematic review process precisely outlined the search and selection stages, leading to a critical evaluation of the included studies for risk of bias, utilizing Cochrane's tools. This appraisal revealed varied levels of bias, highlighting a need for a cautious interpretation of the findings.

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The review delved into the intricacies of IF impacts on gut microbiota, dissecting the methodologies employed across studies to assess microbiota composition and diversity. Through this exploration, it emerged that while several studies observed changes in microbiota richness and diversity, the findings were not uniformly consistent, indicating a complex interplay between IF and gut microbiome dynamics.

Analyses of gut microbiota richness and diversity across studies on IF showed varied outcomes, indicating IF's significant but variable impact on the gut microbiome is influenced by demographic and dietary factors. Beta diversity assessments revealed distinct shifts in microbial communities under different IF protocols, highlighting the diet's personalized effects on gut health. Moreover, the composition of gut microbiota demonstrated both consistent and varied changes in bacterial populations, reflecting the complex influence of IF on the gut ecosystem. This variability suggests IF's effects are shaped by the specific fasting approach, individual dietary habits, and baseline microbiome characteristics, pointing to an interaction between diet and gut health.

Additionally, the review illuminated the broader physiological and metabolic implications of IF, including weight loss and dietary changes, across various forms of fasting. While some studies reported significant weight reduction and alterations in energy intake, others highlighted the stability of macronutrient percentages or shifts in food group consumption, painting a complex picture of IF's influence on diet and body composition.

The differential findings across TRF, ADF, and 5:2 diet studies not only reflect the diverse methodologies and populations studied but also hint at the potential for IF to induce specific microbiota and metabolic changes, contingent upon the nature and context of the fasting intervention. As revealed through this review, the variations in dietary intake and its subsequent impact on weight and metabolic health emphasize the intricate relationship between fasting practices, nutritional status, and gut microbiome composition.

Journal reference:

How does intermittent fasting affect the gut microbiome? (2024)

FAQs

How does intermittent fasting affect the gut microbiome? ›

Recent studies suggest that intermittent fasting can alter the composition of the human gut microbiome by increasing taxonomic diversity and promoting microbial remodeling. During fasting, a particular family of anaerobic bacteria called Lachnospiraceae flourished.

How long does intermittent fasting take to heal gut? ›

It's different for everyone and really depends on your overall goal. If you're using intermittent fasting to improve your gut health and symptoms, you may notice benefits after just a few days. For weight loss and improved metabolic health, it could take a month.

How does fast food affect gut microbiome? ›

Junk food diets are often associated with a reduction in the diversity of the gut microbiome. This means that there are fewer different types of microorganisms in the gut, which can have a negative impact on overall health.

What happens to the digestive system during fasting? ›

Fasting gives the digestive system time to rest, so it can reduce the risk or cure health problems indigestion. During fasting, the stomach is also not filled with food for several hours. At this time, stomach acid production will decrease to prevent the erosion of the stomach wall by acid.

Does intermittent fasting heal leaky gut? ›

The ability of intermittent fasting to lower inflammation has been proven (25). More recent research has shown that alternate-day fasting and time-restricted fasting methods appear to improve gut permeability. This means they make the gut less leaky.

How long does it take for diet to change gut microbiome? ›

Based on the data we have now, it likely takes a matter of weeks and months, rather than days, to make a significant change to your gut microbiome. Certain species can rapidly shift and change within 1-3 days, though some of these changes are thought to be fairly transient.

What to expect after 2 weeks of intermittent fasting? ›

Things to consider

It may take 2 to 4 weeks for your body to get used to eating on an intermittent fasting schedule. During those first few weeks, you may have headaches and feel hungry, grouchy, or tired. Know you may feel this way before you start and make a plan to push through these feelings.

Does fasting reduce gut inflammation? ›

These results indicate that intermittent fasting may have modulatory effects on the immune system and reduce intestinal inflammation [14].

How long does it take for intermittent fasting to reduce inflammation? ›

Other studies have found somewhat similar things. A 2013 study concluded that fasting for more than 24 hours may lower inflammation by reducing oxidative stress in cells.

What can throw off your gut microbiome? ›

A low-fiber, high-fat, high-protein diet is a main contributing factor to the depletion of fiber-degrading microbes in populations in industrialized countries [7]. In healthy humans, a high-fat, high-protein, and low-fat diet leads to reduced gut microbiota diversity as quickly as one day [41].

How long does it take to starve bad gut bacteria? ›

Restoration of gut flora depends on your gut conditions, the severity of imbalance, and metabolism. However, you must follow healthy dietary habits constantly to maintain a normal gut microbiome. It may take 6 to 12 months for you to correct your gut flora.

What disrupts gut microbiome? ›

In a healthy body, pathogenic and symbiotic microbiota coexist without problems. But if there is a disturbance in that balance—brought on by infectious illnesses, certain diets, or the prolonged use of antibiotics or other bacteria-destroying medications—dysbiosis occurs, stopping these normal interactions.

How long do you need to fast to reset your gut? ›

While a prolonged fast of 3–5 days aligns with the gut lining's turnover rate and facilitates cell regeneration, studies have shown that shorter fasts of around 16–24 hours can still yield positive changes in the gut microbiome, offering digestive benefits without the need for an extended fast.

Does fasting clean out your gut? ›

Initial evidence suggests that intermittent fasting may benefit your gut health, particularly by increasing the diversity of your gut microbiome and the “good” gut bugs that make their home there. Certain foods may improve your gut health while intermittent fasting, as well as help support you during fasting periods.

Which organ is affected by fasting? ›

The most immediate organ affected by a fast is the pancreas. During times of low plasma glucose, the pancreas will release more glucagon from the alpha cells found in the islets of Langerhans. Glucagon will mainly affect the liver as it stores most of the glycogen in the body.

Does a 72 hour fast heal your gut? ›

Fasting is one of the most effective ways to reset your gut health, to heal leaky gut and improve digestion. When given a break from digesting, the cells of your gut regenerate and produce a whole new lining within 3 days!

How to reset gut microbiome? ›

Gut resets aim to restore the balance of the microbiome by:
  1. removing foods that feed harmful bacteria and cause inflammation.
  2. introducing plenty of prebiotic foods, which feed beneficial bacteria.
  3. encouraging healthful practices, such as getting enough sleep and exercise and staying hydrated.
Nov 28, 2023

Do probiotics interrupt intermittent fasting? ›

Probiotic bacteria themselves do not contain calories and so would not be considered to break a fast. However, consuming probiotic foods such as probiotic yogurt, kombucha, kefir, and tempeh, would break a fast as these foods contain calories.

What happens to our gut microbiome when starved? ›

These results establish that prolonged starvation leads to significant alterations in intestinal microbiome composition including marked enrichment of Vibrio genus members, and that these alterations in microbiome composition are largely normalized within 1–3 days of refeeding [41, 42, 48].

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